Information for 18-AAAMAATTRGMAARGA (Motif 27)

C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C G T A C G T G T A C A G C T C G T A G T C A A C G T A C G T A C T G G A C T A G C T A C G T
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.7 +/- 21.0bp
Average Position of motif in Background48.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAMAATTRGMAARGA
TAATCAATTA-------
 A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAMAATTRGMAARGA
ATAAACAATTAAACA---
 A C G T A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAMAATTRGMAARGA
AAAAACCAATTAAGAA---
 A C G T A C G T A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAMAATTRGMAARGA
AAAGTAATTAGTGAAT-
 A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAMAATTRGMAARGA
TAATTAATTAATAATTA
 A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAMAATTRGMAARGA
GNNAATTAATTAATCA---
 A C G T A C G T A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAMAATTRGMAARGA
AAACMATTAN------
 C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAMAATTRGMAARGA
GGAAAAATTGTTAGGAA
 A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAMAATTRGMAARGA
AACAACCAATTAATTC---
 A C G T A C G T A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAMAATTRGMAARGA
GGAATAATTACCTCAG-
 A C G T C G T A C T G A C G T A G T A C C G T A C G T A A C G T A C G T C T G A A C T G G T C A G T C A C G T A T C A G C T A G C G T A
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T