Information for 15-MATTTAAWAACATGCT (Motif 24)

T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
Reverse Opposite:
C G T A A C T G A G T C C T G A A C G T C T A G C G A T C A G T C G A T A C G T A C G T C G T A C T G A G T C A G C A T A C G T
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.676
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif90.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets52.6 +/- 26.2bp
Average Position of motif in Background43.1 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MATTTAAWAACATGCT
NATTCAAAT-------
 T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:MATTTAAWAACATGCT
TCTTTANTAATANN--
 T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MATTTAAWAACATGCT
TAATTTAATTA------
 A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MATTTAAWAACATGCT
--TTTAAT--------
 T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MATTTAAWAACATGCT
ATATTAATTAA-----
 T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----MATTTAAWAACATGCT
TAATTAATTAATAACTA---
 A C G T A C G T A C G T A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--MATTTAAWAACATGCT
GCAATAAAAA--------
 A C G T A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MATTTAAWAACATGCT
NNAATTAATGACCNNN-
 A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--MATTTAAWAACATGCT
TNAATTTTATTACCTN--
 A C G T A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-MATTTAAWAACATGCT
TAATTTAATTA------
 A C G T T G C A C G T A A C G T G A C T C G A T C G T A G T C A C G T A G C T A G C T A G A T C G T C A A G C T T C A G T A G C G C A T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T