Information for 10-GAACTATGTGGATTTT (Motif 18)

A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A C G T A A C G T G T A C A G T C C T G A A G T C C G T A A C G T G T C A A C T G A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 30.3bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAACTATGTGGATTTT-
-AACAATGTGCAGTGTT
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T A C G T
A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GAACTATGTGGATTTT-
------TGTGGATTNNN
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAACTATGTGGATTTT
----NNTGTGGATTSS
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAACTATGTGGATTTT----
----NNATTGGACTTTNGNN
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Vdr/MA0693.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAACTATGTGGATTTT
TGAACTCNATGAACTC-
 A C G T A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAACTATGTGGATTTT
GAACAATGGN------
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAACTATGTGGATTTT
GAACAATGG-------
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GAACTATGTGGATTTT
NNNNNGAACAATTGANN----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GAACTATGTGGATTTT
TTAAGAACAATAAATT----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAACTATGTGGATTTT
GAACADWATGTTCTT-
 A C T G C G T A C G T A G T A C A C G T C G T A A C G T C T A G A G C T A C T G A C T G G T C A G A C T A G C T A G C T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T