Information for 9-TTGTKTCAGSTTCTCT (Motif 17)

A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A A T C G C T G A C G T A A T C G A T G C C G A T A C T G C G T A G T A C C G T A A G T C C G T A C T G A
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGTKTCAGSTTCTCT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGTKTCAGSTTCTCT
-AGTTTCAGTTTC---
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGTKTCAGSTTCTCT--
NAGTTTCABTHTGACTNW
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGTKTCAGSTTCTCT
-ACTTTCACTTTC---
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTKTCAGSTTCTCT
-AGTTTCGGTTTCGTT
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGTKTCAGSTTCTCT
-AGTTTCAKTTTC---
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGTKTCAGSTTCTCT
-ASTTTCASTTYC---
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTKTCAGSTTCTCT
TCAGTTTCATTTTCC--
 A C G T A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGTKTCAGSTTCTCT
TGGTTTCAGT------
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTGTKTCAGSTTCTCT
--GTTTCACTTCCG--
 A G C T C G A T A C T G A C G T C A G T A C G T A G T C C G T A A T C G T A C G A C G T A G C T A T G C A C G T A G T C A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T