p-value: | 1e-11 |
log p-value: | -2.570e+01 |
Information Content per bp: | 1.916 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 62.8 +/- 17.4bp |
Average Position of motif in Background | 61.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0176.1_Sox5_2/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG -TATCATAATTAAGGA |
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PHOX2A/MA0713.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG -TAATTTAATTA---- |
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Phox2b/MA0681.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG -TAATTTAATTA---- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG- CTTAACCACTTAAGGAT |
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PROP1/MA0715.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG -TAATTTAATTA---- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAACATACTTAAGAG TTGACCTANTTATN-- |
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Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG NTAATBNAATTA---- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTAACATACTTAAGAG------ -----NTNNTTAAGTGGTTANN |
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Nkx2-5/MA0063.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CTAACATACTTAAGAG ---------TTAATTG |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTAACATACTTAAGAG CNTTAAGTACTTAANG- |
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