Information for 5-TGATGCCCCGAGT (Motif 9)

A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
Reverse Opposite:
C T G A A T G C A C G T A T G C C T A G A C T G A C T G A T C G A G T C C G T A A C G T A G T C C T G A
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 26.8bp
Average Position of motif in Background53.7 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATGCCCCGAGT
ANANNTGATACCCNATN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGATGCCCCGAGT
--ATGCCCACC--
 A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGATGCCCCGAGT-
--ATGCCCTGAGGC
 A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGATGCCCCGAGT---
AGGAGACCCCCAATTTG
 A C G T A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATGCCCCGAGT
ANANGTGATACCCCATT-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATGCCCCGAGT
ANNNATGATACCCCATC-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATGCCCCGAGT
AATNTTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGATGCCCCGAGT
--CTGCCCGCA--
 A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGATGCCCCGAGT
---TGCCCAGNHW
 A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGATGCCCCGAGT-
--WTGSCCTSAGGS
 A G C T A C T G G T C A A C G T A C T G A T G C A G T C A G T C A G T C A T C G C G T A A T C G A G C T A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C