Information for 4-AGCAAAGCCTGTCKKT (Motif 15)

C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
Reverse Opposite:
G C T A G T A C G T C A C T A G T C G A A G T C C G T A A C T G A T C G G A T C A G C T A G C T C A G T A T C G A T G C C G A T
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.705
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.1 +/- 23.2bp
Average Position of motif in Background43.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGCAAAGCCTGTCKKT--
------GSCTGTCACTCA
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCAAAGCCTGTCKKT--
--AAGCACCTGTCAATAT
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T A C G T A C G T
A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGCAAAGCCTGTCKKT
NNNGGGHAGCAHRTGCTRCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCAAAGCCTGTCKKT
GCAGCCAAGCGTGACN--
 A C G T A C G T C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGCCTGTCKKT
SCAGYCADGCATGAC---
 A C G T A C G T C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGCAAAGCCTGTCKKT---
-------NCTGTCAATCAN
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCAAAGCCTGTCKKT
--CNAGGCCT------
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AGCAAAGCCTGTCKKT
-------GCTGTCAA-
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGCCTGTCKKT
GAGGGCAGCCAAGCGTGAC---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGCAAAGCCTGTCKKT
-------GCTGTG---
 C G T A A T C G A T G C G C T A C T G A C T G A C T A G A T G C A G T C G A C T T C A G A C G T A G T C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T