Information for 2-RARGRRAAGGAAR (Motif 2)

T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A
Reverse Opposite:
A G C T A G C T C G A T A G T C G T A C A C G T G A C T A G C T A G T C A G T C A G T C A C G T A G C T
p-value:1e-9
log p-value:-2.260e+01
Information Content per bp:1.721
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.74%
Number of Background Sequences with motif426.0
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets49.6 +/- 23.1bp
Average Position of motif in Background49.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:RARGRRAAGGAAR----
--GGAAANTGAAACTNA
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:RARGRRAAGGAAR--
---GAAAMTGAAACT
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RARGRRAAGGAAR--
---GRAASTGAAAST
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:RARGRRAAGGAAR---
----NDCAGGAARTNN
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:RARGRRAAGGAAR-
----ANCAGGAAGT
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RARGRRAAGGAAR-
--CGGAAGTGAAAC
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RARGRRAAGGAAR-
----AVCAGGAAGT
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RARGRRAAGGAAR--
---GGAAGTGAAAST
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RARGRRAAGGAAR-
----NACAGGAAAT
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RARGRRAAGGAAR--
---GAAAGTGAAAGT
 T C G A T G C A C T A G A C T G C T A G C T G A C T G A C G T A C A T G A C T G C G T A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T