Information for 9-TCACGTGTCACATGTC (Motif 17)

C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
Reverse Opposite:
A T C G C G T A A T G C C T G A A G C T C T A G A C G T T A C G C G T A A T G C C G T A A G T C C T A G A G C T C T A G G C T A
p-value:1e-2
log p-value:-5.933e+00
Information Content per bp:1.783
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACGTGTCACATGTC
-CACGTGDC-------
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCACGTGTCACATGTC
--AGGTGTGAAM----
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCACGTGTCACATGTC
GCACGTGT--------
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCACGTGTCACATGTC
-CACGTGNC-------
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGTCACATGTC
AACACGTGTT-------
 A C G T C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCACGTGTCACATGTC
TCACGTGC--------
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCACGTGTCACATGTC
-CACGTGBN-------
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCACGTGTCACATGTC
------GTCACATGAY
 C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGTCACATGTC
GGCACGTGTC-------
 A C G T C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGTCACATGTC
GGCACGTGNC-------
 A C G T C G A T A G T C C T G A A G T C T A C G A C G T A T C G C G A T A T G C C G T A A G T C C T G A A G C T A T C G C G A T A T G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T