Information for 19-GAACGCACGCACG (Motif 28)

A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.794e+00
Information Content per bp:1.946
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.7 +/- 29.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GAACGCACGCACG
--TBGCACGCAA-
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAACGCACGCACG---
AGCGGCACACACGCAA
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GAACGCACGCACG
-----CACGCA--
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAACGCACGCACG
----GCACGTNC-
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAACGCACGCACG
----GCACGTAY-
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAACGCACGCACG
---BGCACGTA--
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAACGCACGCACG-
----GCACGTACCC
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAACGCACGCACG---
TGGCGCGCGCGCCTGA
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAACGCACGCACG
-CRCCCACGCA--
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GAACGCACGCACG----
-------GGCACGCGTC
 A C T G G T C A C G T A G T A C A C T G A G T C C G T A G T A C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C