Information for 11-YTTTWTTTAG (Motif 26)

A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G
Reverse Opposite:
T A G C G A C T G T C A C G T A C G T A G C A T T G C A T G C A C T G A C T A G
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.673
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.72%
Number of Background Sequences with motif2198.4
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets50.7 +/- 28.2bp
Average Position of motif in Background51.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:YTTTWTTTAG-
-TTTTATTRGN
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:YTTTWTTTAG
NTTTTATTGG
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:YTTTWTTTAG
TTTTTATTGC
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:YTTTWTTTAG
TTTTTATTGG
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---YTTTWTTTAG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:YTTTWTTTAG-
NTTTTATTACN
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:YTTTWTTTAG-
-TTTAATTGCN
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:YTTTWTTTAG
NTTTTATTGG
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:YTTTWTTTAG-
-TTTTATKRGG
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

MNX1/MA0707.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YTTTWTTTAG-
-TTTAATTANN
 A G T C A G C T A C G T A C G T C G T A C G A T A C G T A C G T C T G A A T C G A C G T
A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C