Information for 3-AAGAAGCTAAAGAGGC (Motif 23)

G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C
Reverse Opposite:
A T C G G A T C G T A C C G A T G T A C A G C T C G A T C A G T C G T A C A T G A G T C G C A T C A G T A T G C G A C T A C G T
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.651
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets49.0 +/- 25.7bp
Average Position of motif in Background48.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-2.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGAAGCTAAAGAGGC---
---AANTTCAAGTGGCTTN
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGAAGCTAAAGAGGC---
---AATTTCAAGTGGCTTN
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGAAGCTAAAGAGGC---
---AAATTCAAGTGGNTTN
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGAAGCTAAAGAGGC---
---AATNTTAAGTGGNTNN
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAGAAGCTAAAGAGGC
----ATGTAAACADGS
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C
A C G T A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGAAGCTAAAGAGGC---
--GACGATAATGAGCTTGC
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAGAAGCTAAAGAGGC
---WWTRTAAACAVG-
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGAAGCTAAAGAGGC
AAGAGGATTAG-----
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AAGAAGCTAAAGAGGC---
--AAACATAATGAGGTTGC
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C A C G T A C G T A C G T
A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AAGAAGCTAAAGAGGC
------GTAAACA---
 G T C A C T G A A T C G G C T A C G T A A C T G G A T C G C A T G T C A C G T A C T G A A C T G C G T A C A T G C A T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T