Information for 6-CGGGCGGTAG (Motif 20)

A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
Reverse Opposite:
A G T C G C A T T G C A A G T C A G T C A T C G A G T C A G T C T A G C A C T G
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets58.2 +/- 22.7bp
Average Position of motif in Background53.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGGGCGGTAG-
-GGGCGGGACC
 A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G A C G T
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGGCGGTAG--
-GGGCGGGAAGG
 A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGGCGGTAG--
-GGGCGGGAAGG
 A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCGGTAG
TNNGGGCAG---
 A C G T A C G T A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGGCGGTAG
--GGCVGTTR
 A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGCGGTAG
CTTCGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGGGCGGTAG
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGCGGTAG-
BTKGGCGGGAAA
 A C G T A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGGCGGTAG
CWGGCGGGAA
 A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGCGGTAG--
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A C T G A C T G A T G C C T A G C T A G A C G T C G T A A C T G A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A