Information for 3-BGATYGGCTG (Motif 14)

A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G
Reverse Opposite:
G T A C T C G A T A C G G T A C T A G C C T G A T G C A G A C T G T A C T G A C
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.500
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif713.4
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets49.7 +/- 27.0bp
Average Position of motif in Background48.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:BGATYGGCTG--
TGATTGGCTANN
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:BGATYGGCTG-
---TWGTCTGV
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:BGATYGGCTG
---TTGGCA-
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-BGATYGGCTG
CCGATTGGCT-
 A C G T A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:BGATYGGCTG
-----NGCTN
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:BGATYGGCTG-
--NTTGGCANN
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-BGATYGGCTG----
CTGATTGGTCNATTT
 A C G T A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:BGATYGGCTG
--CTAGGCCT
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-BGATYGGCTG------
NAGANTGGCGGGGNGNA
 A C G T A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:BGATYGGCTG-----
GGNGCGNCTGTTNNN
 A C T G C A T G C T G A A C G T G A C T A T C G C A T G A T G C A G C T C A T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T