Information for 3-AGCACAYACTAACCAC (Motif 4)

C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
Reverse Opposite:
C A T G A C G T C T A G T A C G A C G T A G C T C T G A A C T G A C G T C T G A A C G T A C T G A C G T A C T G G A T C G A C T
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.720
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.4 +/- 27.2bp
Average Position of motif in Background40.4 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCACAYACTAACCAC
CGAAGCACACAAAATA---
 A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCACAYACTAACCAC
TCCATCCCATAATACTC--
 A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCACAYACTAACCAC
AGCGGCACACACGCAA---
 A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGCACAYACTAACCAC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCACAYACTAACCAC-----
-CCCCAAACCACCCCCCCCCA
 C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCACAYACTAACCAC
-CCGCATAGCAACGGA
 C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGCACAYACTAACCAC
TACATGTGCACATAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGCACAYACTAACCAC--
--------NAAACCACAG
 C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:AGCACAYACTAACCAC---
---------AAACCACAGC
 C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGCACAYACTAACCAC
CAGATGTGCACATACGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A G T C T C G A A G T C C G T A A G C T C G T A T A G C A G C T C T G A G T C A A G T C A G T C C G T A G T A C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T A C G T A C G T