Information for 6-CCTGATCTAACTCCCT (Motif 13)

A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
Reverse Opposite:
C G T A C T A G A T C G A C T G C G T A A C T G A C G T G A C T C G T A A C T G C T G A A C G T A G T C C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.334e+01
Information Content per bp:1.925
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 24.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT
--TGACCTARTT----
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT-
-CTGAGGTAATTACCNC
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T A C G T
A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PH0045.1_Hoxa1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGATCTAACTCCCT-
-CTGAGCTAATTACCGT
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T A C G T
A C G T A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT
-TTGACCTANTTATN-
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT
-ATGATGCAAT-----
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT
TCTTATCT--------
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCTGATCTAACTCCCT
-MTGATGCAAT-----
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCTGATCTAACTCCCT-
-NTGNGCTAATTACCNN
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T A C G T
A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTGATCTAACTCCCT
NCCTTATCTG-------
 A C G T A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGATCTAACTCCCT
YCTTATCTBN------
 A G T C A G T C A C G T A C T G C G T A A G C T A G T C A C G T C G T A C G T A A G T C A C G T G T A C A T G C A G T C A C G T
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T