Information for 7-TTTCAGAACA (Motif 10)

A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A
Reverse Opposite:
A C G T A T C G A C G T A C G T A T G C C G A T T A C G C G T A C G T A G T C A
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.844
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif137.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets55.2 +/- 24.8bp
Average Position of motif in Background50.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTCAGAACA----
NTTNAGAACAATTA
 A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGAACA
ATTGCACAATA
 A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAGAACA
VTTRCATAAY-
 A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGAACA----
ATGTCACAACAACAC
 A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTCAGAACA------
NNTNANAACAATTNNA
 A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGAACA-----
ATATCAAAACAAAACA
 A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTCAGAACA-------
-TTAAGAACAATAAATT
 A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTCAGAACA-------
-TTTAGAACAATAAAAT
 A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTCAGAACA
CGGTTTCAAA---
 A C G T A C G T A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGAACA-----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T G C A T A T G C C G T A T A C G C G T A G T C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A