Information for 5-SCACCTSRYGGCCAAA (Motif 4)

A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
Reverse Opposite:
A C G T G A C T A G C T A C T G A C T G A G T C A G T C C T G A A G T C A T G C C G T A A C T G A C T G A C G T A C T G A T G C
p-value:1e-15
log p-value:-3.673e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 32.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----SCACCTSRYGGCCAAA
TAGCGCCCCCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------SCACCTSRYGGCCAAA
ANAGTGCCACCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------SCACCTSRYGGCCAAA
CNNBRGCGCCCCCTGSTGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SCACCTSRYGGCCAAA
NNCACCTGNN-------
 A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-SCACCTSRYGGCCAAA
CGCACCTGCT-------
 A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SCACCTSRYGGCCAAA
SNGCACCTGCHS------
 A C G T A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----SCACCTSRYGGCCAAA
NNTNCGCACCTGTNGAN----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-SCACCTSRYGGCCAAA
TACACCTGTC-------
 A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:SCACCTSRYGGCCAAA
---------TGCCAA-
 A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-SCACCTSRYGGCCAAA
AACACCTGCT-------
 A C G T A T C G A G T C G T C A A G T C A G T C A C G T A T C G T C A G G A C T A C T G A C T G A G T C A G T C C T G A C G T A C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T