Information for 11-YTTAACAATTKTA (Motif 19)

A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
Reverse Opposite:
A G C T C G T A T G A C C G T A C G T A A C G T A C G T A T C G A G C T A C G T G T C A C G T A T C A G
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.758
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif59.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.6 +/- 23.6bp
Average Position of motif in Background48.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--YTTAACAATTKTA
NNCNNAACAATTNT-
 A C G T A C G T A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--YTTAACAATTKTA--
TNCNNAACAATTTTTNC
 A C G T A C G T A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YTTAACAATTKTA-
NNNTAACAATTATAN
 A C G T A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---YTTAACAATTKTA
NNTNANAACAATTNNA
 A C G T A C G T A C G T A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YTTAACAATTKTA
GTAAACAAT----
 A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YTTAACAATTKTA
---AACAAT----
 A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YTTAACAATTKTA--
ATAAACAATTAAACA
 A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YTTAACAATTKTA
--NAACAAT----
 A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:YTTAACAATTKTA
-TTMACACCTT--
 A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YTTAACAATTKTA--
AATGAACAATGGAATT
 A C G T A G T C A C G T A C G T T G C A C T G A A T G C C G T A T C G A C G A T A C G T A C T G A C G T C T G A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T