Information for 10-CAAAGTCTAT (Motif 16)

A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G C G T A A G T C A C G T C G A T A C G T A C T G
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 29.7bp
Average Position of motif in Background60.6 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAAAGTCTAT---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTCTAT
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTCTAT
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGTCTAT-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAAGTCTAT
AAAAGTCAA-
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAGTCTAT-
TATTGTTTATT
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTCTAT---
AAAAAATCGATAAT
 A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTCTAT---
AAAAAATCGATAAT
 A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTCTAT---
AAAAAATCAATAAT
 A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAAGTCTAT
--TWGTCTGV
 A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G