Information for 11-CCAGCCGTGA (Motif 45)

A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A C T G A C T G A G T C A C G T A T C G A C T G
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.959
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 14.5bp
Average Position of motif in Background64.9 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCAGCCGTGA
CCAGCTGTTN
 A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCAGCCGTGA--
----NCGTGACN
 A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAGCCGTGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGCCGTGA
-CAGCC----
 A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCGTGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAGCCGTGA
--AGGTGTGA
 A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCAGCCGTGA
-CAGCTGTT-
 A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCGTGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAGCCGTGA--
GCAGCCAAGCGTGACN
 A C G T A C G T A C G T A C G T A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCGTGA
TCCAGATGTT-
 A C G T A G T C A T G C C G T A A C T G A G T C A G T C A C T G A C G T A C T G C G T A
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T