Information for 10-TCTAGTTGCG (Motif 20)

A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G
Reverse Opposite:
G T A C A C T G G T A C G T C A C G T A A G T C A C G T C T G A A T C G C G T A
p-value:1e-9
log p-value:-2.083e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 23.3bp
Average Position of motif in Background25.0 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTAGTTGCG-----
TNTGGTTTCGATACN
 A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCTAGTTGCG
GKMTCADRTTWC-
 A C G T A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTAGTTGCG-----
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCTAGTTGCG------
-NTGGTTTCGGTTNNN
 A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTAGTTGCG--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTAGTTGCG
ACTAGTTAAC
 A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTAGTTGCG
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCTAGTTGCG---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTTGCG--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTAGTTGCG
-CTAATKGV-
 A C G T A T G C A G C T C G T A A C T G A C G T A C G T A C T G G T A C A C T G
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T