Information for 9-TCCGCTCCCA (Motif 19)

A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
Reverse Opposite:
G C A T C T A G A C T G A T C G C G T A C T A G A G T C A C T G A C T G C G T A
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.846
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif223.1
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets42.2 +/- 23.5bp
Average Position of motif in Background48.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCCGCTCCCA
GCCCCGCCCC
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCCGCTCCCA
-CCCCCCCC-
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCCGCTCCCA
GCCCCACCCA
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCGCTCCCA-
GCCACGCCCCC
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCTCCCA
GCTCCGCCCMCY
 A C G T A C G T A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCGCTCCCA
GCCACACCCA
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCGCTCCCA
GCCMCRCCCH
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCCGCTCCCA---
CTATCCCCGCCCTATT
 A C G T A C G T A C G T A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A A C G T A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCGCTCCCA
GGCCACACCCA
 A C G T A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCCGCTCCCA
---GCTCCG-
 A C G T A G T C A G T C T C A G A G T C G C A T A T G C G T A C A G T C C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T