Information for 4-CAGATYTCAGGTTCTC (Motif 5)

A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
Reverse Opposite:
T A C G G T C A C T A G G T C A G C T A A T G C A G T C A G C T A T C G C T G A C T A G C T G A C G A T A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.5 +/- 31.6bp
Average Position of motif in Background44.4 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGATYTCAGGTTCTC
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGATYTCAGGTTCTC
--TATTTCCGGTT---
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGATYTCAGGTTCTC
--AGTTTCAGTTTC--
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGATYTCAGGTTCTC
--ACTTTCACTTTC--
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAGATYTCAGGTTCTC
-----NNCAGGTGTN-
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGATYTCAGGTTCTC
-AAATCACAGCA----
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAGATYTCAGGTTCTC
-----NNCAGGTGCG-
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAGATYTCAGGTTCTC-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CAGATYTCAGGTTCTC
-----AACAGGTGT--
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CAGATYTCAGGTTCTC
-----NNCAGGTGNN-
 A G T C C T G A C T A G C G T A G A C T G A T C A G C T A T G C C T G A A C T G T A C G C G A T A C G T G A T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T