Information for 3-TCSGGCGCCCCYT (Motif 3)

A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G C T A G A T C G A C T G A C T G A T G C C T A G A G T C A G T C T A G C A C T G C G T A
p-value:1e-12
log p-value:-2.895e+01
Information Content per bp:1.845
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.9 +/- 26.1bp
Average Position of motif in Background45.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCSGGCGCCCCYT-
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCSGGCGCCCCYT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGCGCCCCYT-
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCSGGCGCCCCYT
-AGCGCGCC----
 A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGCGCCCCYT-
NTCGCGCGCCTTNNN
 A C G T A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGCGCCCCYT-
ANCGCGCGCCCTTNN
 A C G T A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCSGGCGCCCCYT--------
--TAGCGCCCCCTGGTGGCCA
 A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCSGGCGCCCCYT
TTTGGCGCCAAA-
 A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCSGGCGCCCCYT----
-----CGCCCCCTGACA
 A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCSGGCGCCCCYT----
GGTCCCGCCCCCTTCTC
 A C G T A G T C A T C G T A C G A C T G A G T C A T C G A G T C A G T C A T G C A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C