Information for 10-ACTCGCTGGCATT (Motif 10)

C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G G T A C A C T G C T G A A C T G A G C T
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets80.4 +/- 17.5bp
Average Position of motif in Background39.4 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACTCGCTGGCATT
---GGTTGGCAT-
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACTCGCTGGCATT--
CAATCACTGGCAGAAT
 A C G T C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTCGCTGGCATT--
NGTAGGTTGGCATNNN
 A C G T C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTCGCTGGCATT
----NTTGGCANN
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACTCGCTGGCATT
--GGTCTGGCAT-
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ACTCGCTGGCATT
-----TTGGCA--
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACTCGCTGGCATT---
NNNCAGCTGTCAATATN
 A C G T C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACTCGCTGGCATT
---NGTGGGCAT-
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACTCGCTGGCATT
----CTTGGCAA-
 C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTCGCTGGCATT
CGCCCCCTGACA--
 A C G T C T G A A G T C A G C T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T