Information for 1-TGACCTDAGDAGT (Motif 3)

A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
Reverse Opposite:
G T C A A T G C A C G T G C T A A T G C A G C T G T A C C G T A A C T G A T C G A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 24.0bp
Average Position of motif in Background38.8 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACCTDAGDAGT
TGACCTYA-----
 A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGACCTDAGDAGT
TGACCT-------
 A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTDAGDAGT
GTGACCTT------
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACCTDAGDAGT
NTGACCTTGA----
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGACCTDAGDAGT
TGACCTTGAT---
 A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTDAGDAGT
CTGACCTTTG----
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTDAGDAGT
CNNTTGACCTTTG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTDAGDAGT
ATGACCTTGA----
 A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCTDAGDAGT
TGACCYCT-----
 A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTDAGDAGT
NNNGTGACCTTTGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A C G T C A T G C T G A A T C G C A G T C G T A A T C G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T