Information for 3-AGGGCGACTG (Motif 4)

T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G
Reverse Opposite:
T G A C C T G A C A T G G C A T T G A C T A C G A G T C G T A C T G A C A G C T
p-value:1e-12
log p-value:-2.913e+01
Information Content per bp:1.652
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif604.2
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets51.9 +/- 28.2bp
Average Position of motif in Background50.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCGACTG---
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCGACTG-----
CNNNGCTACTGTANNN
 A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGGCGACTG-----
GGNGCGNCTGTTNNN
 T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGGCGACTG-
-VBSYGTCTGG
 T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL002.1_INR/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGGCGACTG-
---NNNANTGA
 T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCGACTG-----
TNNTGCTACTGTNNNN
 A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCGACTG
TAATGGCGGNC-
 A C G T A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCGACTG-
TAAGGCGTCTTG
 A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGGCGACTG
GGAGGGGGAA--
 A C G T A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGGGCGACTG-
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G T C A G A T G C A C T G C G T A G T A C G A C T A C T G A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G