Information for 9-ACGGTGCTGCGGT (Motif 18)

T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T
Reverse Opposite:
T G C A A T G C G A T C A T C G A T G C T G C A T A C G T G A C G T C A T A G C A T G C A T C G A G C T
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.545
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 11.6bp
Average Position of motif in Background34.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT
-CGCAGCTGCG--
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT
----NGCTN----
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT
-CGGAGC------
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACGGTGCTGCGGT
-----GCTGTG--
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT--
------TTGCGGTTT
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACGGTGCTGCGGT--
-----GCTGTGGTTT
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT----
-CNNNGCTACTGTANNN
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT----
--GGNGCGNCTGTTNNN
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACGGTGCTGCGGT----
-TNNTGCTACTGTNNNN
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGGTGCTGCGGT--
----GTCTGTGGTTT
 T C G A T A G C T A C G A T C G C A G T A C T G A T G C A C G T T A C G T A G C C T A G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T