Information for 10-YCMGSWGCTCYTR (Motif 15)

A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A C T A G A C T G C G T A A C T G A G T C C G A T A T C G A G T C A C T G A C T G C T A G
p-value:1e-5
log p-value:-1.229e+01
Information Content per bp:1.831
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 25.3bp
Average Position of motif in Background61.6 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----YCMGSWGCTCYTR
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YCMGSWGCTCYTR----
--AGATGCTRCTRCCHT
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:YCMGSWGCTCYTR
-CAGCTGNT----
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YCMGSWGCTCYTR
--AGCAGCTGCT-
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-YCMGSWGCTCYTR
AGCAGCTGCTNN--
 A C G T A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YCMGSWGCTCYTR
--CNGTCCTCCC-
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:YCMGSWGCTCYTR
------GCTCCG-
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:YCMGSWGCTCYTR
NCAGCTGCTG---
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:YCMGSWGCTCYTR
-----NGCTN---
 A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YCMGSWGCTCYTR
TGCAGCTGTCCCT-
 A C G T A G T C A G T C G T A C A C T G A T G C C G T A A C T G A G T C A C G T A G T C A G T C A C G T C T A G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T