Information for 1-AATATTTTACCTGACA (Motif 1)

C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T G T A C G C T A A C T G A C T G C G A T C G T A C G T A C T G A C G T A A G C T C G T A A G C T A C G T
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.909
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.0 +/- 27.5bp
Average Position of motif in Background55.1 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AATATTTTACCTGACA
TTAATGTTTAACC-----
 A C G T A C G T C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTTACCTGACA
NNTNNCAATATTAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTTACCTGACA
NNTNNCAATATTAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:AATATTTTACCTGACA
--------ARNTGACA
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.54
Offset:10
Orientation:forward strand
Alignment:AATATTTTACCTGACA-
----------TTGACAG
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AATATTTTACCTGACA--
--------VGCTGWCAVB
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AATATTTTACCTGACA
AATAATT---------
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AATATTTTACCTGACA-
-ANATTTTACGAGNNNN
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A A C G T
A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AATATTTTACCTGACA
TTAATNATTAAC------
 A C G T A C G T C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AATATTTTACCTGACA
---NTTTTACGAGN--
 C G T A C T G A A C G T C T G A C G A T A G C T A C G T A C G T G C T A A G T C G T A C C A G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T