Information for 4-GAGCACAACCTAA (Motif 8)

C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C T G C G A T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.335e+01
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 29.2bp
Average Position of motif in Background20.3 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCACAACCTAA---
GATAACATCCTAGTAG
 C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAGCACAACCTAA
CAGATGTGCACATACGT-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGCACAACCTAA
GGCCACACCCAN-
 C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAACCTAA-
AGCGGCACACACGCAA
 A C G T A C G T C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAACCTAA
NWAACCACADNN---
 A C G T A C G T C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGCACAACCTAA
GGCCACACCCA--
 C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGCACAACCTAA
-ACCACATCCTGT
 C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACAACCTAA
AAACCACAGC----
 A C G T C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACAACCTAA
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGCACAACCTAA----
-NNNNCAACCTTCGNGA
 C T A G C G T A A C T G A G T C C G T A A G T C C G T A C G T A G T A C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A