Information for 3-AKTTTMYWAKMASRSR (Motif 3)

C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
Reverse Opposite:
A G T C A T C G A G C T A T C G A C G T A C T G G T C A A C G T C G A T C T A G A C G T C G T A C G T A C G T A G T A C A C G T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.775
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.75%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.3 +/- 15.2bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AKTTTMYWAKMASRSR
--TTTCCCAGAAN---
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AKTTTMYWAKMASRSR
-ATTTCCAAGAA----
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AKTTTMYWAKMASRSR
NNNTTTNTAATACNG--
 A C G T C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AKTTTMYWAKMASRSR
-NTTTCTNAGAAA---
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AKTTTMYWAKMASRSR
NAATTTTACGAGNTNN--
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AKTTTMYWAKMASRSR
NNNTTTCCTGGAAA---
 A C G T C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AKTTTMYWAKMASRSR
NTTTTACGAGN-----
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AKTTTMYWAKMASRSR
ANATTTTACGAGNNNN--
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AKTTTMYWAKMASRSR
--TTTCCTGGAAA---
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKTTTMYWAKMASRSR
-TTTTATTRGN-----
 C G T A A C T G A C G T A C G T A C G T G T C A A G T C C G T A C G T A A C G T G T A C C G T A A T G C C T G A A T G C C T A G
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T