Information for 5-CGACCCTGAC (Motif 25)

G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
Reverse Opposite:
A C T G A G C T A T G C C G T A C T A G A T C G C A T G A C G T T G A C C A T G
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.831
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif121.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets44.1 +/- 23.0bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAC--
TGACCTTGACCT
 G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAC--
TGACCTTGACCT
 G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGACCCTGAC
NATGACCTTGA-
 A C G T A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGACCCTGAC
ATGACCTTGAA
 A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGACCCTGAC--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAC
TGACCTTGAV
 G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGAC
TGACCTTGAN
 G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGACCCTGAC
AAGACCCYYN-
 A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGACCCTGAC
TCAGNGAGCGTGAC
 A C G T A C G T A C G T A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGACCCTGAC
ATGACCTTGA-
 A C G T G T A C A C T G G T C A G A T C A T G C A G T C A C G T A T C G C T G A G T A C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T