Information for 17-ACAGAGCAGTAAC (Motif 23)

C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T C G T A A G T C A C G T C T A G G T A C A G C T A T G C A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.861
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 29.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGTAAC
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGTAAC
GAGCACAGCAGGACA
 A C G T A C G T C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACAGAGCAGTAAC
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAGAGCAGTAAC
-CACAGCAGGGGG
 C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACAGAGCAGTAAC-
---NATGAGTCACN
 C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCAGTAAC
ACAAAG-------
 C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACAGAGCAGTAAC
AACCCGGAAGTAA-
 A C G T C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A A C G T

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACAGAGCAGTAAC-
---GATGAGTCATN
 C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCAGTAAC----
NNNCAGCTGTCAATATN
 C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGCAGTAAC
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T G T C A C G T A A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A