Information for 4-AGTGGGCTGC (Motif 20)

T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C
Reverse Opposite:
C T A G G T A C C G T A A C T G A T G C A G T C A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.831
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif197.2
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets53.2 +/- 27.2bp
Average Position of motif in Background50.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTGGGCTGC---
-GTGGCGTGACNG
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGCTGC
NGCGTGGGCGGR
 A C G T A C G T T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTGGGCTGC-
-GTGGGGTGAT
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTGGGCTGC-
-ATGGGGTGAT
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTGGGCTGC-
-GTGGGCCCCA
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGTGGGCTGC----
TATTATGGGATGGATAA
 A C G T A C G T A C G T T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGGGCTGC-
-ATGGGGTGAT
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGTGGGCTGC-
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGCTGC
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGTGGGCTGC
----NGCTN-
 T C G A C T A G G C A T A C T G C T A G A T C G T G A C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T