p-value: | 1e-13 |
log p-value: | -3.128e+01 |
Information Content per bp: | 1.773 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.77% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 59.3 +/- 25.3bp |
Average Position of motif in Background | 58.9 +/- 13.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0116.1_Nkx2-9/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAGTACCTTACAT TTTTAAGTACTTAAATT |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAGTACCTTACAT TACTAAGTACTTAAATG |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAGTACCTTACAT CNTTAAGTACTTAANG- |
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Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAGTACCTTACAT------ GAAGTANCACGAATNMRAGT |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACCTTACAT ACTCCAAGTACTTGGAA- |
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PH0045.1_Hoxa1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGTACCTTACAT ACGGTAATTAGCTCAG-- |
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PH0053.1_Hoxa6/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACCTTACAT AAGGTAATTACCTAAT-- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGTACCTTACAT- ---NNACTTACCTN |
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PH0049.1_Hoxa2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACCTTACAT AAGGTAATTAGCTCAT-- |
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PH0103.1_Meox1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAGTACCTTACAT GAGGTAATTACCTCAG-- |
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