Information for 3-GATCMTWACC (Motif 9)

A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T G C T A C T G A A C G T A C T G C T G A A C G T A G T C
p-value:1e-4
log p-value:-1.047e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.51%
Number of Background Sequences with motif169.3
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets49.2 +/- 21.4bp
Average Position of motif in Background52.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GATCMTWACC--
NNAGATNVNWATCTN
 A C G T A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATCMTWACC--
-NNACTTACCTN
 A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATCMTWACC
DGATCRATAN-
 A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATCMTWACC-
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATCMTWACC
NGGATTAN----
 A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATCMTWACC----
AAGGTAATTACCTAAT
 A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GATCMTWACC
--YCATTAMC
 A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATCMTWACC-----
CTGATCGAAACCAAAGT
 A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GATCMTWACC----
ACTATGCCAACCTACC
 A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0049.1_Hoxa2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GATCMTWACC--
NTGAGCTAATTACCNT
 A C G T A C G T A C G T A C G T A C T G G T C A A G C T A G T C G T C A A G C T C G A T C G T A A G T C A G T C A C G T A C G T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T