Information for 9-ACATGCATAC (Motif 15)

C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C
Reverse Opposite:
C T A G C A G T C T G A A C G T A C T G G T A C G T C A A G C T C T A G C G A T
p-value:1e-7
log p-value:-1.614e+01
Information Content per bp:1.833
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif73.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.2 +/- 22.7bp
Average Position of motif in Background45.8 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACATGCATAC--
--ATGMATATDC
 C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACATGCATAC----
AAAATATGCATAATAAA
 A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACATGCATAC---
ATATGCAAATNNN
 C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACATGCATAC---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACATGCATAC--
--ATGAATATTC
 C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACATGCATAC-
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACATGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACATGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGCATAC
ATATGCAAAT
 C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACATGCATAC-
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C G T A C T G G T A C C G T A G A C T G T C A G A T C A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T