Information for 7-AGTGCTATTT (Motif 12)

C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.942
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.4 +/- 22.9bp
Average Position of motif in Background41.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGTGCTATTT-----
---KCTATTTTTRGH
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGTGCTATTT-----
---GCTATTTTTGGM
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGTGCTATTT-------
--TTCTATTTTTAGNNN
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AGTGCTATTT----
----CTATTTTTGG
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTATTT--
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGTGCTATTT-----
---GCTATTTTTAGC
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTATTT
TTAAGTGCTT---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTGCTATTT-----
---GCTATTTATAGC
 C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTGCTATTT
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCTATTT----
CCTTGCAATTTTTNN
 A C G T C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C