Information for 5-ATGTAAAGGG (Motif 10)

C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C G T A G C T C G T A A G T C G T C A A G C T
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.2 +/- 23.1bp
Average Position of motif in Background54.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAAGGG
GNCTATAAAAGG
 A C G T A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAAGGG-
TATGCWAATBAV
 A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGTAAAGGG--
ANGNAAAGGTCA
 C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAAGGG
TATGCAAAT--
 A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAAGGG-
WATGCAAATGAG
 A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATGTAAAGGG---
-TGTCAGGGGGCG
 C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAAGGG
TTATGCAAAT--
 A C G T A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGTAAAGGG-
-GCTAAACGGT
 C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATGTAAAGGG-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAAGGG-
ATATGCAAATNNN
 A C G T A C G T C T G A A C G T T C A G G C A T C T G A G T C A C G T A C T A G A C T G A C T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A