Information for 1-STGGAAATTTCCAGVA (Motif 1)

A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A C T G C T A G C G T A C G T A G C T A G A C T A C G T A C G T G T A C A G T C G T C A A T G C
p-value:1e-13
log p-value:-3.196e+01
Information Content per bp:1.676
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.7 +/- 23.7bp
Average Position of motif in Background52.4 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--STGGAAATTTCCAGVA--
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:STGGAAATTTCCAGVA
--GGAAATTCCC----
 A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:STGGAAATTTCCAGVA
-TAGAANVTTCTAGAA
 A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-STGGAAATTTCCAGVA
AATGGAAAAT-------
 A C G T A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:STGGAAATTTCCAGVA
-TGGAAAA--------
 A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-STGGAAATTTCCAGVA
AATGGAAAAT-------
 A C G T A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-STGGAAATTTCCAGVA
NNTGGAAANN-------
 A C G T A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-STGGAAATTTCCAGVA
NATGGAAAAN-------
 A C G T A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:STGGAAATTTCCAGVA
--GGAAATTCCC----
 A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:STGGAAATTTCCAGVA
---GAANNTTCTAGAA
 A T C G A C G T A C T G A C T G T C G A T C G A C T G A C G A T G A C T C G A T A G T C G T A C G T C A T C A G T C G A G C T A
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A