Information for 4-KHGTDDGTTATGTGGA (Motif 9)

A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A
Reverse Opposite:
C A G T A T G C A G T C G T C A T G A C G C T A G A C T C G T A C G T A T G A C G T A C G C T A G T C A A G T C C A G T G T A C
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.651
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif40.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.8 +/- 20.9bp
Average Position of motif in Background50.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA---
---NNNNTTGTGTGCTTNN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA----
---NTNNTTAAGTGGNTNAN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA----
---NTNNTTAAGTGGTTANN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA---
---AATNTTAAGTGGNTNN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA
-------TTAAGTGGT
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA
-------TTAAGTGGN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:KHGTDDGTTATGTGGA
------BTBRAGTGSN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA
------NTCAAGTGGN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA---
---AAATTCAAGTGGNTTN
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.57
Offset:11
Orientation:reverse strand
Alignment:KHGTDDGTTATGTGGA-
-----------GTGGAT
 A C T G G T C A C T A G A C G T C G A T C A T G A C T G A C G T G A C T C T G A C G A T A C T G A C G T A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T