Information for 16-VTCCACTCTGTGATCA (Motif 37)

T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A
Reverse Opposite:
A C G T C T A G C T G A A C G T A G T C G T C A A G T C C T G A A C T G C G T A A C T G G C A T C A T G A C T G C T G A A C T G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 25.4bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:VTCCACTCTGTGATCA-----
----ACCGGTTGATCACCTGA
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--VTCCACTCTGTGATCA--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:VTCCACTCTGTGATCA
ATCCAC----------
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:VTCCACTCTGTGATCA-
---------NGGATTAN
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:VTCCACTCTGTGATCA
-TGAACCCGATGACCC
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:VTCCACTCTGTGATCA-
---------RGGATTAR
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:VTCCACTCTGTGATCA-
---------GGGATTAA
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:VTCCACTCTGTGATCA--
---------GGGATTANN
 T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

RARA::RXRA/MA0159.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-VTCCACTCTGTGATCA
TGACCTCTCNNTGACCT
 A C G T T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---VTCCACTCTGTGATCA
NTCNTCCCCTATNNGNN--
 A C G T A C G T A C G T T A G C A G C T A G T C G T A C C G T A A G T C A C G T G T A C G A C T C T A G A C G T A C T G C G T A A G C T A G T C C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T