Information for 14-CCTGTATGTCAAAATT (Motif 27)

A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
Reverse Opposite:
C G T A C G T A A G C T A C G T A C G T A C G T A T C G C G T A A T G C G T C A A C G T C G T A G T A C C G T A C A T G A C T G
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.786
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 26.4bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
----TATGTAAATAT-
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
----TATGTAAATAT-
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
----TAAGTAAACAAA
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
----AAAGTAAACA--
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
---GAAAGTGAAAGT-
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
----AAAGTAAACA--
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTGTATGTCAAAATT-
--NCWRWGTAAACANSV
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T A C G T
A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT
-ATCAAGGTCA-----
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTGTATGTCAAAATT
---GAAAGTGAAAGT-
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTGTATGTCAAAATT-
--AGAAAGTGAAAGTGA
 A G T C G T A C C G A T A C T G C G A T C G T A A C G T A T C G A C G T A T G C C G T A C G T A T G C A C T G A C G A T C G A T A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A