Information for 1-TCTCAYYAWTMTT (Motif 2)

A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A C G T A C G A T C T G A C T A G C G A T A C T G C G T A A C T G C G T A
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 22.4bp
Average Position of motif in Background24.1 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCTCAYYAWTMTT
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCTCAYYAWTMTT
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCTCAYYAWTMTT
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTCAYYAWTMTT
AGCTCATTAT----
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTCAYYAWTMTT---
-CTCATGAATATTCAT
 A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCTCAYYAWTMTT------
-----CTAATATTGCTAAA
 A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCTCAYYAWTMTT------
-----CTAATATTGCTAAA
 A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCTCAYYAWTMTT-
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTCAYYAWTMTT-
GACNTCATTAATAANN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTCAYYAWTMTT-
CTTTCANTATGACTV
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G C T C G T A C G A T A C G T G T A C A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C