Information for 11-TDCACTCNGGCTTCAC (Motif 19)

C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
Reverse Opposite:
T A C G C A G T C T A G G T C A C T G A A T C G T G A C G A T C C G T A A T C G G T C A C T A G A G C T A C T G G C T A G C T A
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.661
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.1 +/- 27.3bp
Average Position of motif in Background46.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TDCACTCNGGCTTCAC
MRSCACTYAA-------
 A C G T C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TDCACTCNGGCTTCAC
---------GCTTCC-
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TDCACTCNGGCTTCAC-
TGCAGTCATGCGTGACG
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TDCACTCNGGCTTCAC-
NGCANTCATGCGTGACG
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TDCACTCNGGCTTCAC
AGCCACTCAAG------
 A C G T C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TDCACTCNGGCTTCAC
AASCACTCAA-------
 A C G T C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TDCACTCNGGCTTCAC
RSCACTYRAG------
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TDCACTCNGGCTTCAC
NSCACTYVAV------
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TDCACTCNGGCTTCAC
-SCAGYCADGCATGAC
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TDCACTCNGGCTTCAC
-WCATTTTGKCCTCYT
 C G A T C G A T G T A C C T G A A G T C A C G T A T G C G C A T C A T G A C T G A T G C G A C T A C G T A G T C G T C A A G T C
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T