Information for 2-TCACAGAAAG (Motif 8)

A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G
Reverse Opposite:
G T A C A C G T A C G T G C A T A G T C A C G T C T A G G A C T C T A G G T C A
p-value:1e-3
log p-value:-8.055e+00
Information Content per bp:1.679
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif145.9
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets37.8 +/- 21.8bp
Average Position of motif in Background47.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCACAGAAAG
NTTTCTNAGAAA-
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCACAGAAAG-
-AACAGGAAGT
 A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCACAGAAAG---
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCACAGAAAG---
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCACAGAAAG----
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCACAGAAAG
ATTTCCAAGAA--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCACAGAAAG---
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TCACAGAAAG-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCACAGAAAG--
--ACAGGAAGTG
 A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCACAGAAAG---
-CACAGCAGGGGG
 A C G T A G T C C G T A A G T C C G T A T A C G C G T A C G T A T G C A A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G