Information for 4-CAYGCTGYTGCTG (Motif 7)

A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
Reverse Opposite:
T A G C T C G A C T A G T G A C C G T A C T G A A T G C C T G A T A C G A G T C T C G A A C G T A T C G
p-value:1e-4
log p-value:-1.003e+01
Information Content per bp:1.601
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif74.1
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets66.0 +/- 24.2bp
Average Position of motif in Background46.9 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAYGCTGYTGCTG
CCTGCTGAGH---
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAYGCTGYTGCTG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAYGCTGYTGCTG----
--AGATGCTRCTRCCHT
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAYGCTGYTGCTG-
----CTGTTCCTGG
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAYGCTGYTGCTG
--CNGTCCTCCC-
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAYGCTGYTGCTG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAYGCTGYTGCTG
--TKCTGTTCCA-
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAYGCTGYTGCTG
ANCCACCTGTTGCNC
 A C G T A C G T A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAYGCTGYTGCTG
CCCCCTGCTGTG-
 A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CAYGCTGYTGCTG
AGNACAGNCTGTTCTN-
 A C G T A C G T A C G T A C G T A T G C G T C A A G C T T A C G A T G C A G C T T A C G A G C T C G A T A C T G A G T C A C G T A T C G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T