Information for 5-AAVCTGTTTTTCTVAT (Motif 6)

G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T
Reverse Opposite:
T G C A A G C T A C G T C T G A A C T G G T C A C G T A G T C A C G T A C T G A A T G C C G T A C T A G A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.662
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets17.0 +/- 2.0bp
Average Position of motif in Background17.1 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAVCTGTTTTTCTVAT
NAAACCGGTTTT------
 A C G T A C G T G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT--
----NNTTTTTCTTATNT
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT
---NTGTTTAYATWW-
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT----
-----NNNTTTNTAATACNG
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT--
---GTNTTGTTGTGANNT
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT
------NTTTTACGAC
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT----
----NAATTTTACGAGNTNN
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:forward strand
Alignment:AAVCTGTTTTTCTVAT-
---TAATTGTTCTAAAC
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AAVCTGTTTTTCTVAT
AANTTATTGTTCTNNA
 G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-AAVCTGTTTTTCTVAT---
AAACYKGTTWDACMRGTTTB
 A C G T G T C A G T C A T A C G A G T C C G A T A T C G A G C T C G A T A C G T G C A T A C G T T G A C A G C T T C G A C T G A A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T